PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT24994
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 331aa    MW: 36062.8 Da    PI: 10.6472
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT24994genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.31.2e-31265322359
               -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               D+y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYegeHnh+
  EMT24994 265 DEYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERCVDDPSMLIVTYEGEHNHT 322
               9*************************988****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105331.6E-19216261IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.803.5E-34251322IPR003657WRKY domain
PROSITE profilePS5081130.297258324IPR003657WRKY domain
SuperFamilySSF1182902.48E-27261322IPR003657WRKY domain
SMARTSM007742.6E-38263323IPR003657WRKY domain
PfamPF031062.3E-27265321IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005516Molecular Functioncalmodulin binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MAVASCHRVL GLLAQTQDPA QLRSIALGTD EACAKFRKVV SLLGNGNEGG GTHPRAKLVS  60
RRQTPGFLSQ KSFLDNNTPV VVLNSAHPST SSAQVYPRNS SILDSQPAHP IGGPPKLVQP  120
LSAHFQFGDS SRYNQFQQHQ HQQQKMRAEM FKRSNSGINL KFDSPSGTGT MSSARSFMSS  180
LSMDGSVASL DAKSSSFHLI GGPAMSDPVN AQQAPRRRCS GRGEDGNGKC AATGRCHCSK  240
RRKLRLKRTI KVPAISNKIA DIPPDEYSWR KYGQKPIKGS PHPRGYYKCS SVRGCPARKH  300
VERCVDDPSM LIVTYEGEHN HTRMPTQSAQ A
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-20251325275WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU6654280.0EU665428.1 Triticum aestivum WRKY16 transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003562250.10.0PREDICTED: protein WRKY1-like isoform X2
SwissprotQ93WU62e-86WRK74_ARATH; Probable WRKY transcription factor 74
TrEMBLM8BSN90.0M8BSN9_AEGTA; Putative WRKY transcription factor 39
STRINGMLOC_77258.20.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP28593887
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04670.14e-72WRKY DNA-binding protein 39